This function assigns cells into spatial spots. Each spot may contain zero, one, or
multiple cells. Spots with zero cells won't be in the output.
Usage
multicell(expr, spatial, NoSpot = 500, cl = 1)
Arguments
- expr
expression profile of the cells
- spatial
spatial features like their spatial X and Y coordinates.
- NoSpot
Number of targeted spots.
Value
- count:
Expression profile of the spots.
- spot_feature:
Spot feature such as spot center coordinates and cell allocations
within the spots .